病毒组软件Viromescan问题

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  ./options_parser_priv.hpp:246 [3] argument missing (missing required option paired)
            ERROR:  ./options_parser_priv.hpp:246 [3] argument missing (missing required option paired) <srprism.cpp:850>
            real        0m0.004s
            user        0m0.001s
            sys        0m0.002s
           FAILED: srprism for ./tmp//bmtagger.1572261505.localhost.122110.short

Then, I changed line 34 of bmtagger.sh from, srprismopts="-b 100000000 -n 5 -R 0 -r 1 -M 7168" to srprismopts="-b 100000000 -n 5 -R 0 -r 1 -M 7168 -p true" because I came across the following sentence in the bmtagger,.sh script.

"notes: "You may find it necessary to create a bmtagger.conf file to specify paired or single-end searching. The file should contain the line 'srprismopts=\"-b 100000000 -n 5 -R 0 -r 1 -M 7168\"' along with '-p true' or '-p false' for paired, and single, respectively. This config file can be passed to bmtagger.sh via the '-C' option." "

After the above correction, I am getting the below error.

           paired_stream.hpp:154 [1] inconsistent columns (ids do not match: A00821:155:HNNC7DSXX:1:1101:22571:2033 , A00821:155:HNNC7DSXX:1:1101:26675:3223)
           ERROR:   paired_stream.hpp:154 [1] inconsistent columns (ids do not match: A00821:155:HNNC7DSXX:1:1101:22571:2033 , A00821:155:HNNC7DSXX:1:1101:26675:3223) <srprism.cpp:850>
           real        0m1.714s
           user        0m0.543s
           sys        0m1.106s
          FAILED: srprism for ./tmp//bmtagger.1572261557.localhost.122477.short

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