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MIT公开课-视频-课件-代码-数据

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发表于 2017-2-18 14:10:13 | 显示全部楼层 |阅读模式
都在主页上面!
生物信息学不多:
https://ocw.mit.edu/courses/biol ... 014/lecture-slides/
https://ocw.mit.edu/courses/elec ... 2005/lecture-notes/

我就不一一列出了,都是好资源!
Lecturer Key
[CB] = Christopher Burge
[DG] = David Gifford
[EF] = Ernest Fraenkel
[GL] = Guest Lecturer

LEC #
TOPICS
LECTURERS
1Course Introduction: History of Computational Biology; Overview of the Course; Course Policies and Mechanics; DNA Sequencing Technologies (PDF - 5.0MB)CB, DG, EF
Genomic Analysis
2Local Alignment (BLAST) and Statistics (PDF - 2.0MB)CB
3Global Alignment of Protein Sequences (NW, SW, PAM, BLOSUM) (PDF)CB
4Comparative Genomic Analysis of Gene Regulation (PDF - 2.9MB)CB
Genomic Analysis—Next Gen Sequencing
5Library Complexity and Short Read Alignment (Mapping) (PDF - 1.4MB)DG
6Genome Assembly (PDF)DG
7ChIP-seq Analysis; DNA-protein Interactions (PDF - 2.0MB)DG
8RNA-sequence Analysis: Expression, Isoforms (PDF - 2.9MB)DG
Modeling Biological Function
9Modeling and Discovery of Sequence Motifs (Gibbs Sampler, Alternatives) (PDF)CB
10Markov and Hidden Markov Models of Genomic and Protein Features (PDF)CB
11RNA Secondary Structure–Biological Functions and Prediction (PDF - 1.6MB)CB
Proteomics
12Introduction to Protein Structure; Structure Comparison and Classification (PDF - 3.1MB)EF
13Predicting Protein Structure (PDF - 3.4MB)EF
14Predicting Protein Interactions (PDF - 4.7MB)EF
Regulatory Networks
15Gene Regulatory Networks (PDF - 6.1MB)EF
16Protein Interaction Networks (PDF - 7.6MB)EF
17Logic Modeling of Cell Signaling Networks (PDF - 3.1MB) Guest Lecture: Doug LauffenburgerGL
18Analysis of Chromatin Structure (PDF - 3.8MB)DG
Computational Genetics
19Discovering Quantitative Trait Loci (QTLs) (PDF - 2.8MB)DG
20Human Genetics, SNPs, and Genome Wide Associate Studies (PDF - 3.3MB)DG
21
Synthetic Biology: From Parts to Modules to Therapeutic Systems. Guest Lecture: Ron Weiss
Slides of this guest lecture are not available.
GL
22
Causality, Natural Computing, and Engineering Genomes. Guest Lecture: George Church
Slides of this guest lecture are not available.
GL


然后是:

LEC #
TOPICS
LECTURERS
Part 1: Using DNA Sequence to Explain Mechanism
1Course Introduction (PDF)David Gifford
2Pairwise Alignment (PDF)David Gifford
3Finding Regulatory Sequences in DNA: Motif Discovery (PDF)Tommi Jaakkola
4Finding Regulatory Sequences in DNA: Motif Discovery (cont.) (PDF)Tommi Jaakkola
Part 2: Observing the Mechanism of Transcriptional Regulation
5Microarray Technology (PDF)David Gifford
6Expression Arrays, Normalization, and Error Models (PDF)Tommi Jaakkola
7Expression Profiles, Clustering, and Latent Processes (PDF)Tommi Jaakkola
8Computational Functional Genomics (PDF)David Gifford
9Stem Cells and Transcriptional RegulationDavid Gifford
10Part One: An Example of Clustering Expression Data (PDF)

Part Two: Computational Functional Genomics (cont.) (PDF)
David Gifford
11Project Group Meetings
12Project Group Initial PresentationsStudents
13Computational Discovery of Regulatory Networks (PDF - 2.3 MB) (Courtesy of Georg Gerber. Used with permission.)Georg Gerber (Guest Lecturer)
14RNA Silencing (PDF)David Bartel (Guest Lecturer)
Part 3: Building Predictive Network Models of Transcriptional Regulation
15Computational Functional Genomics (cont.) (PDF)David Gifford
16Human Regulatory Networks (PDF)David Gifford
17Protein NetworksDavid Gifford
18Causal Models (PDF)Tommi Jaakkola
19Causal Bayesian Networks, Active Learning (PDF)Tommi Jaakkola
20From Biological Data to Biological Insight (PDF)Nir Friedman (Guest Lecturer)
21Modeling Transcriptional Regulation (PDF)Tommi Jaakkola
22DynamicsDavid Gifford




上一篇:伪控制——DNA去中心论
下一篇:安装完rMATS软件之后,想测试下是否安装成功,提示pysam模....
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 楼主| 发表于 2017-2-18 14:12:09 | 显示全部楼层
视频,需要翻墙去youtube看:https://www.youtube.com/watch?v=1EMonM7qAU8
你这个问题很复杂,需要打赏,请点击 http://www.bio-info-trainee.com/donate 进行打赏,谢谢
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